NCI-H209Homo sapiens (Human)Cancer cell line

Also known as: H209, H-209, NCIH209

🤖 AI SummaryBased on 16 publications

Quick Overview

Small cell lung cancer cell line with known genetic alterations

Detailed Summary

The NCI-H209 cell line is a small cell lung cancer (SCLC) model derived from a bone marrow metastasis of a 55-year-old male patient. It is widely used in cancer research due to its well-characterized genetic profile, including mutations in key oncogenes and tumor suppressor genes. This cell line has been extensively studied for its role in understanding SCLC biology, drug sensitivity, and genomic alterations. Research on NCI-H209 has contributed to identifying potential therapeutic targets and mechanisms of resistance in SCLC.

Research Applications

Cancer genomicsDrug sensitivity testingGenomic alterations in SCLCTherapeutic target identification

Key Characteristics

Mutations in TP53 and CDKN2AAmplifications of MYC family genesSensitivity to PARP inhibitorsExpression of E2F1-regulated factors
Generated on 6/17/2025

Basic Information

Database IDCVCL_1525
SpeciesHomo sapiens (Human)
Tissue SourceBone marrow[UBERON:UBERON_0002371]

Donor Information

Age55
Age CategoryAdult
SexMale
Racecaucasian

Disease Information

DiseaseLung small cell carcinoma
LineageLung
SubtypeSmall Cell Lung Cancer
OncoTree CodeSCLC

DepMap Information

Source TypeATCC
Source IDACH-000290_source

Known Sequence Variations

TypeGene/ProteinDescriptionZygosityNoteSource
MutationSimpleRB1p.Cys706Phe (c.2117G>T)Homozygous-Unknown, Unknown, Unknown
MutationSimpleTP53c.673-2A>T (IVS6-2A>T)UnspecifiedSplice acceptor mutationPubMed=11799138

Haplotype Information (STR Profile)

Short Tandem Repeat (STR) profile for cell line authentication.

Amelogenin
X
CSF1PO
11
D13S317
11
D16S539
9,12
D18S51
13
D19S433
14.2,15
D21S11
32.2
D2S1338
17,20
D3S1358
18
D5S818
12
D7S820
9
D8S1179
12,13
FGA
20,24
Penta D
11,12
Penta E
11,12
TH01
7,9
TPOX
8
vWA
18,19
Gene Expression Profile
Gene expression levels and statistical distribution
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Full DepMap dataset with combined data across cell lines

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Publications

Neuromedin B is present in lung cancer cell lines.";

Giaccone G., Battey J., Gazdar A.F., Oie H.K., Draoui M., Moody T.W.

Cancer Res. 52:2732s-2736s(1992).

Establishment and identification of small cell lung cancer cell lines having classic and variant features.

Moody T.W., Zweig M.H., Minna J.D.

Cancer Res. 45:2913-2923(1985).

Cytogenetics of human small cell lung cancer.";

Whang-Peng J., Lee E.C.

Recent Results Cancer Res. 97:37-46(1985).

Heterogeneity in the radiation survival curves and biochemical properties of human lung cancer cell lines.

Mitchell J.B.

J. Natl. Cancer Inst. 73:801-807(1984).

Monoclonal antibodies that demonstrate specificity for several types of human lung cancer.

Cuttitta F., Rosen S.T., Gazdar A.F., Minna J.D.

Proc. Natl. Acad. Sci. U.S.A. 78:4591-4595(1981).

High levels of intracellular bombesin characterize human small-cell lung carcinoma.

Moody T.W., Pert C.B., Gazdar A.F., Carney D.N., Minna J.D.

Science 214:1246-1248(1981).

Analysis of human small cell lung cancer differentiation antigens using a panel of rat monoclonal antibodies.

Gazdar A.F., Minna J.D.

Cancer Res. 44:2052-2061(1984).

Secretion of atrial natriuretic peptide and vasopressin by small cell lung cancer.

Lofters W.S., Flynn T.G.

Cancer 75:2442-2451(1995).

Insulin-like growth factor expression in human cancer cell lines.";

Grimley C., Battey J., Mulshine J.L., Cuttitta F.

J. Biol. Chem. 271:11477-11483(1996).

NCI-Navy Medical Oncology Branch cell line data base.";

Carney D.N., Minna J.D., Mulshine J.L.

J. Cell. Biochem. Suppl. 24:32-91(1996).

MYC family DNA amplification in 126 tumor cell lines from patients with small cell lung cancer.

Ihde D.C., Gazdar A.F.

J. Cell. Biochem. Suppl. 24:210-217(1996).

Allelotyping demonstrates common and distinct patterns of chromosomal loss in human lung cancer types.

Minna J.D., Gazdar A.F.

Genes Chromosomes Cancer 21:308-319(1998).

Investigation of the genes for RET and its ligand complex, GDNF/GFR alpha-I, in small cell lung carcinoma.

Rabbitts P.H., Sundaresan V., Hofstra R.M.W., Eng C.

Genes Chromosomes Cancer 21:326-332(1998).

Expression of the MRP and MDR1 multidrug resistance genes in small cell lung cancer.

Cole S.P.C., Gerlach J.H.

Clin. Cancer Res. 3:115-122(1997).

Coexpression of transcripts encoding EPHB receptor protein tyrosine kinases and their ephrin-B ligands in human small cell lung carcinoma.

Tang X.X., Brodeur G.M., Campling B.G., Ikegaki N.

Clin. Cancer Res. 5:455-460(1999).

Comprehensive analysis of p53 gene mutation characteristics in lung carcinoma with special reference to histological subtypes.

Fujita T., Kiyama M., Tomizawa Y., Kohno T., Yokota J.

Int. J. Oncol. 15:927-934(1999).

Genome-wide allelotyping of lung cancer identifies new regions of allelic loss, differences between small cell lung cancer and non-small cell lung cancer, and loci clustering.

Girard L., Zochbauer-Muller S., Virmani A.K., Gazdar A.F., Minna J.D.

Cancer Res. 60:4894-4906(2000).

Mutation and expression of the DCC gene in human lung cancer.";

Yokota J.

Neoplasia 2:300-305(2000).

Protein expression of the RB-related gene family and SV40 large T antigen in mesothelioma and lung cancer.

Modi S., Kubo A., Oie H.K., Coxon A.B., Rehmatulla A., Kaye F.J.

Oncogene 19:4632-4639(2000).

Searching for microsatellite mutations in coding regions in lung, breast, ovarian and colorectal cancers.

Minna J.D.

Oncogene 20:1005-1009(2001).

High-resolution analysis of DNA copy number using oligonucleotide microarrays.

Weber B., Shapero M.H., Wooster R.

Genome Res. 14:287-295(2004).

Chromosome abnormalities in 10 lung cancer cell lines of the NCI-H series analyzed with spectral karyotyping.

Grigorova M., Lyman R.C., Caldas C., Edwards P.A.W.

Cancer Genet. Cytogenet. 162:1-9(2005).

Integrative genomic analysis of small-cell lung carcinoma reveals correlates of sensitivity to bcl-2 antagonists and uncovers novel chromosomal gains.

Sauter G., Lesniewski R., Semizarov D.

Mol. Cancer Res. 5:331-339(2007).

A gene-alteration profile of human lung cancer cell lines.";

Montuenga L.M., Minna J.D., Yokota J., Sanchez-Cespedes M.

Hum. Mutat. 30:1199-1206(2009).

A small-cell lung cancer genome with complex signatures of tobacco exposure.

Stratton M.R., Futreal P.A., Campbell P.J.

Nature 463:184-190(2010).

Signatures of mutation and selection in the cancer genome.";

Deloukas P., Yang F.-T., Campbell P.J., Futreal P.A., Stratton M.R.

Nature 463:893-898(2010).

A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.

Haber D.A.

Cancer Res. 70:2158-2164(2010).

Prevalence of human papillomavirus 16/18/33 infection and p53 mutation in lung adenocarcinoma.

Iwakawa R., Kohno T., Enari M., Kiyono T., Yokota J.

Cancer Sci. 101:1891-1896(2010).

MicroRNA expression distinguishes SCLC from NSCLC lung tumor cells and suggests a possible pathological relationship between SCLCs and NSCLCs.

Gazdar A.F., Pertsemlidis A.

J. Exp. Clin. Cancer Res. 29:75.1-75.12(2010).

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.

Morrissey M.P., Sellers W.R., Schlegel R., Garraway L.A.

Nature 483:603-607(2012).

Proteomic profiling identifies dysregulated pathways in small cell lung cancer and novel therapeutic targets including PARP1.

Heymach J.V.

Cancer Discov. 2:798-811(2012).

Genome-wide identification of genes with amplification and/or fusion in small cell lung cancer.

Yokota J.

Genes Chromosomes Cancer 52:802-816(2013).

A comprehensive transcriptional portrait of human cancer cell lines.

Settleman J., Seshagiri S., Zhang Z.-M.

Nat. Biotechnol. 33:306-312(2015).

A resource for cell line authentication, annotation and quality control.

Neve R.M.

Nature 520:307-311(2015).

TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.

Loewer M., Sahin U., Castle J.C.

Genome Med. 7:118.1-118.7(2015).

A landscape of pharmacogenomic interactions in cancer.";

Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.

Cell 166:740-754(2016).

An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.

Dutil J., Chen Z.-H., Monteiro A.N.A., Teer J.K., Eschrich S.A.

Cancer Res. 79:1263-1273(2019).

Next-generation characterization of the Cancer Cell Line Encyclopedia.

Sellers W.R.

Nature 569:503-508(2019).

From clinical specimens to human cancer preclinical models -- a journey the NCI-cell line database-25 years later.

Aldige C.R., Wistuba I.I., Minna J.D.

J. Cell. Biochem. 121:3986-3999(2020).

Pan-cancer proteomic map of 949 human cell lines.";

Robinson P.J., Zhong Q., Garnett M.J., Reddel R.R.

Cancer Cell 40:835-849.e8(2022).

Web Resources