NCI-H841Homo sapiens (Human)Cancer cell line

Also known as: NCIH841, NCI-841, H-841, H841

🤖 AI SummaryBased on 13 publications

Quick Overview

Human small cell lung cancer cell line with known genetic alterations.

Detailed Summary

The NCI-H841 cell line is a human small cell lung cancer (SCLC) cell line derived from a patient with lung cancer. It is widely used in cancer research to study the molecular mechanisms of SCLC and to evaluate potential therapeutic targets. This cell line has been characterized for its genetic alterations, including mutations in the RB1 and TP53 genes, which are commonly associated with SCLC. Research on NCI-H841 has contributed to understanding the role of these genes in cancer progression and has been utilized in studies involving drug sensitivity and resistance. The cell line is also part of large-scale genomic and pharmacological profiling efforts, such as the Cancer Cell Line Encyclopedia (CCLE), which provides comprehensive data on drug responses and genetic profiles for various cancer cell lines.

Research Applications

Genomic profilingPharmacological screeningMolecular mechanism studiesDrug sensitivity and resistance research

Key Characteristics

RB1 mutationTP53 mutationSmall cell lung cancer origin
Generated on 6/17/2025

Basic Information

Database IDCVCL_1595
SpeciesHomo sapiens (Human)
Tissue SourceLung[UBERON:UBERON_0002048]

Donor Information

Age51
Age CategoryAdult
SexMale
Racecaucasian

Disease Information

DiseaseThoracic SMARCA4-deficient undifferentiated tumor
LineageLung
SubtypeSMARCA4-deficient undifferentiated tumor

DepMap Information

Source TypeATCC
Source IDACH-000292_source

Known Sequence Variations

TypeGene/ProteinDescriptionZygosityNoteSource
MutationSimpleTP53p.Cys242Ser (c.725G>C)HomozygousGermlinePubMed=31541927, PubMed=25275298, PubMed=23613873, PubMed=18487078, PubMed=18006756, PubMed=15287027, PubMed=12884349
MutationSimpleSMARCA4p.Lys934Ter (c.2800A>T)Homozygous-Unknown, Unknown

Haplotype Information (STR Profile)

Short Tandem Repeat (STR) profile for cell line authentication.

Amelogenin
X,Y
CSF1PO
11
D13S317
12
D16S539
13
D18S51
14,18
D19S433
12,13
D21S11
29,30
D2S1338
24
D3S1358
17
D5S818
11,12
D7S820
10,13
D8S1179
8,16
FGA
22
Penta D
9,16
Penta E
5,10
TH01
6,9
TPOX
11,12
vWA
16,17
Gene Expression Profile
Gene expression levels and statistical distribution
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Full DepMap dataset with combined data across cell lines

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Publications

Molecular and pathologic characterization of YAP1-expressing small cell lung cancer cell lines leads to reclassification as SMARCA4-deficient malignancies.

Burr M.L., Sutherland K.D.

Clin. Cancer Res. 30:1846-1858(2024).

From clinical specimens to human cancer preclinical models -- a journey the NCI-cell line database-25 years later.

Aldige C.R., Wistuba I.I., Minna J.D.

J. Cell. Biochem. 121:3986-3999(2020).

Next-generation characterization of the Cancer Cell Line Encyclopedia.

Sellers W.R.

Nature 569:503-508(2019).

An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.

Dutil J., Chen Z.-H., Monteiro A.N.A., Teer J.K., Eschrich S.A.

Cancer Res. 79:1263-1273(2019).

A landscape of pharmacogenomic interactions in cancer.";

Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.

Cell 166:740-754(2016).

A resource for cell line authentication, annotation and quality control.

Neve R.M.

Nature 520:307-311(2015).

Genome-wide identification of genes with amplification and/or fusion in small cell lung cancer.

Yokota J.

Genes Chromosomes Cancer 52:802-816(2013).

Proteomic profiling identifies dysregulated pathways in small cell lung cancer and novel therapeutic targets including PARP1.

Heymach J.V.

Cancer Discov. 2:798-811(2012).

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.

Morrissey M.P., Sellers W.R., Schlegel R., Garraway L.A.

Nature 483:603-607(2012).

Prevalence of human papillomavirus 16/18/33 infection and p53 mutation in lung adenocarcinoma.

Iwakawa R., Kohno T., Enari M., Kiyono T., Yokota J.

Cancer Sci. 101:1891-1896(2010).

A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.

Haber D.A.

Cancer Res. 70:2158-2164(2010).

A gene-alteration profile of human lung cancer cell lines.";

Montuenga L.M., Minna J.D., Yokota J., Sanchez-Cespedes M.

Hum. Mutat. 30:1199-1206(2009).

Protein expression of the RB-related gene family and SV40 large T antigen in mesothelioma and lung cancer.

Modi S., Kubo A., Oie H.K., Coxon A.B., Rehmatulla A., Kaye F.J.

Oncogene 19:4632-4639(2000).

Mutation and expression of the DCC gene in human lung cancer.";

Yokota J.

Neoplasia 2:300-305(2000).

Comprehensive analysis of p53 gene mutation characteristics in lung carcinoma with special reference to histological subtypes.

Fujita T., Kiyama M., Tomizawa Y., Kohno T., Yokota J.

Int. J. Oncol. 15:927-934(1999).

MYC family DNA amplification in 126 tumor cell lines from patients with small cell lung cancer.

Ihde D.C., Gazdar A.F.

J. Cell. Biochem. Suppl. 24:210-217(1996).

NCI-Navy Medical Oncology Branch cell line data base.";

Carney D.N., Minna J.D., Mulshine J.L.

J. Cell. Biochem. Suppl. 24:32-91(1996).

Lack of c-mpl proto-oncogene transcripts and growth-stimulatory effects of thrombopoietin on human small cell lung cancer cell lines.

Shinohara A., Shimizu E., Takada M., Sone S.

Oncology 53:426-434(1996).