UPCI-SCC-114Homo sapiens (Human)Cancer cell line

Also known as: SCC114, UPCI:SCC114

🤖 AI SummaryBased on 1 publications

Quick Overview

Human head and neck squamous cell carcinoma cell line with TP53 mutations.

Detailed Summary

UPCI-SCC-114 is a human head and neck squamous cell carcinoma cell line that has been analyzed for TP53 mutations. The cell line was part of a study using peptide mass signature genotyping (PMSG) to detect mutations in TP53 exons 5-8 and 9. PMSG identified mutations in this cell line, demonstrating its utility in detecting minority mutations in tumor DNA. The cell line shows a combination of wild-type and mutant signatures, suggesting potential heterogeneity. This cell line is valuable for research on TP53 mutations and their implications in cancer progression and therapy response.

Research Applications

TP53 mutation detectiontumor genotypingcancer research

Key Characteristics

TP53 mutations detectedpeptide mass signature genotyping (PMSG) application
Generated on 6/18/2025

Basic Information

Database IDCVCL_2227
SpeciesHomo sapiens (Human)
Tissue SourceOral cavity, floor of mouth[UBERON:UBERON_0003679]

Donor Information

Age71
Age CategoryAdult
SexMale

Disease Information

DiseaseSquamous cell carcinoma of the oral cavity
LineageHead and Neck
SubtypeOral Cavity Squamous Cell Carcinoma
OncoTree CodeOCSC

DepMap Information

Source TypeDSMZ
Source IDACH-001697_source

Known Sequence Variations

TypeGene/ProteinDescriptionZygosityNoteSource
MutationSimpleTP53p.Arg248Gln (c.743G>A)UnspecifiedSomatic mutation acquired during proliferationPubMed=20575032

Haplotype Information (STR Profile)

Short Tandem Repeat (STR) profile for cell line authentication.

Amelogenin
X
CSF1PO
13
D13S317
11,12
D16S539
11,12
D18S51
12,17
D19S433
14
D21S11
27,30
D2S1338
17
D3S1358
18
D5S818
11
D7S820
8,12
D8S1179
13
FGA
19,22
Penta D
9,12
Penta E
13
TH01
7,9.3
TPOX
9,11
vWA
16,20
Gene Expression Profile
Gene expression levels and statistical distribution
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Full DepMap dataset with combined data across cell lines

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Publications

The influence of clinical and demographic risk factors on the establishment of head and neck squamous cell carcinoma cell lines.

Gollin S.M.

Oral Oncol. 43:701-712(2007).

Detection and assignment of TP53 mutations in tumor DNA using peptide mass signature genotyping.

Ishwad C.S., Jarvik J.W.

Hum. Mutat. 22:158-165(2003).