UPCI-SCC-114Homo sapiens (Human)Cancer cell line
Also known as: SCC114, UPCI:SCC114
🤖 AI SummaryBased on 1 publications
Quick Overview
Human head and neck squamous cell carcinoma cell line with TP53 mutations.
Detailed Summary
UPCI-SCC-114 is a human head and neck squamous cell carcinoma cell line that has been analyzed for TP53 mutations. The cell line was part of a study using peptide mass signature genotyping (PMSG) to detect mutations in TP53 exons 5-8 and 9. PMSG identified mutations in this cell line, demonstrating its utility in detecting minority mutations in tumor DNA. The cell line shows a combination of wild-type and mutant signatures, suggesting potential heterogeneity. This cell line is valuable for research on TP53 mutations and their implications in cancer progression and therapy response.
Research Applications
TP53 mutation detectiontumor genotypingcancer research
Key Characteristics
TP53 mutations detectedpeptide mass signature genotyping (PMSG) application
Generated on 6/18/2025
Basic Information
Database ID | CVCL_2227 |
---|---|
Species | Homo sapiens (Human) |
Tissue Source | Oral cavity, floor of mouth[UBERON:UBERON_0003679] |
Donor Information
Age | 71 |
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Age Category | Adult |
Sex | Male |
Disease Information
Disease | Squamous cell carcinoma of the oral cavity |
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Lineage | Head and Neck |
Subtype | Oral Cavity Squamous Cell Carcinoma |
OncoTree Code | OCSC |
DepMap Information
Source Type | DSMZ |
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Source ID | ACH-001697_source |
Known Sequence Variations
Type | Gene/Protein | Description | Zygosity | Note | Source |
---|---|---|---|---|---|
MutationSimple | TP53 | p.Arg248Gln (c.743G>A) | Unspecified | Somatic mutation acquired during proliferation | PubMed=20575032 |
Haplotype Information (STR Profile)
Short Tandem Repeat (STR) profile for cell line authentication.
Amelogenin
X
CSF1PO
13
D13S317
11,12
D16S539
11,12
D18S51
12,17
D19S433
14
D21S11
27,30
D2S1338
17
D3S1358
18
D5S818
11
D7S820
8,12
D8S1179
13
FGA
19,22
Penta D
9,12
Penta E
13
TH01
7,9.3
TPOX
9,11
vWA
16,20
Gene Expression Profile
Gene expression levels and statistical distribution
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Full DepMap dataset with combined data across cell lines
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Publications
The influence of clinical and demographic risk factors on the establishment of head and neck squamous cell carcinoma cell lines.
Gollin S.M.
Oral Oncol. 43:701-712(2007).