VCaPHomo sapiens (Human)Cancer cell line

Also known as: Vertebral Cancer of the Prostate, Vcap, VCAP

AI Summary

No AI-generated summary available for this cell line.

Basic Information

Database IDCVCL_2235
SpeciesHomo sapiens (Human)
Tissue SourceBone, vertebra[UBERON:UBERON_0002412]

Donor Information

Age59
Age CategoryAdult
SexMale
Racecaucasian

Disease Information

DiseaseProstate carcinoma
LineageProstate
SubtypeProstate Adenocarcinoma
OncoTree CodePRAD

DepMap Information

Source TypeATCC
Source IDACH-000115_source

Known Sequence Variations

TypeGene/ProteinDescriptionZygosityNoteSource
MutationSimpleTP53p.Arg248Trp (c.742C>T)HomozygousSomatic mutation acquired during proliferationfrom parent cell line VCaP
MutationSimpleMLH1p.Ile219Val (c.655A>G)Homozygous-from parent cell line VCaP
Gene fusionERGTMPRSS2-ERG--from parent cell line VCaP

Haplotype Information (STR Profile)

Short Tandem Repeat (STR) profile for cell line authentication.

Amelogenin
X,Y
CSF1PO
10,12
D10S1248
13,14
D12S391
21,23
D13S317
11,12
D16S539
9
D18S51
13
D19S433
13
D1S1656
13,17.3
D21S11
31
D22S1045
16,17
D2S1338
17,25
D2S441
11,14
D3S1358
14,15
D5S818
12
D6S1043
11
D7S820
9,12
D8S1179
12,13
DYS391
11
FGA
21,26
Penta D
9
Penta E
10,12
TH01
9.3
TPOX
8,11
vWA
18,19
Gene Expression Profile
Gene expression levels and statistical distribution
Loading cohorts...
Full DepMap dataset with combined data across cell lines

Loading gene expression data...

Publications

Genomic characterization of preclinical prostate cancer cell line models.

Figg W.D. Sr.

Int. J. Mol. Sci. 25:6111.1-6111.19(2024).

Pan-cancer proteomic map of 949 human cell lines.";

Robinson P.J., Zhong Q., Garnett M.J., Reddel R.R.

Cancer Cell 40:835-849.e8(2022).

Phenotypic characterization of two novel cell line models of castration-resistant prostate cancer.

Yegnasubramanian S.

Prostate 81:1159-1171(2021).

Quantitative proteomics of the Cancer Cell Line Encyclopedia.";

Sellers W.R., Gygi S.P.

Cell 180:387-402.e16(2020).

Comprehensive transcriptomic analysis of cell lines as models of primary tumors across 22 tumor types.

van 't Veer L.J., Butte A.J., Goldstein T., Sirota M.

Nat. Commun. 10:3574.1-3574.11(2019).

Next-generation characterization of the Cancer Cell Line Encyclopedia.

Sellers W.R.

Nature 569:503-508(2019).

An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.

Dutil J., Chen Z.-H., Monteiro A.N.A., Teer J.K., Eschrich S.A.

Cancer Res. 79:1263-1273(2019).

Genomic analysis of DNA repair genes and androgen signaling in prostate cancer.

Paschal B.M.

BMC Cancer 18:960.1-960.20(2018).

Paclitaxel resistance and the role of miRNAs in prostate cancer cell lines.

Sahin A., Balci F.

World J. Urol. 37:1117-1126(2019).

Serum-free complete medium, an alternative medium to mimic androgen deprivation in human prostate cancer cell line models.

Wu Y., Mohler J.L.

Prostate 78:213-221(2018).

Therapy-induced developmental reprogramming of prostate cancer cells and acquired therapy resistance.

Gregory-Evans C.Y., Karnes R.J., Jenkins R.B., Klein E.A., Buttyan R.

Oncotarget 8:18949-18967(2017).

A landscape of pharmacogenomic interactions in cancer.";

Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.

Cell 166:740-754(2016).

Parallel genome-scale loss of function screens in 216 cancer cell lines for the identification of context-specific genetic dependencies.

Golub T.R., Root D.E., Hahn W.C.

Sci. Data 1:140035-140035(2014).

A resource for cell line authentication, annotation and quality control.

Neve R.M.

Nature 520:307-311(2015).

A novel approach for characterizing microsatellite instability in cancer cells.

Lu Y.-H., Soong T.D., Elemento O.

PLoS ONE 8:E63056-E63056(2013).

Gene fusions by chromothripsis of chromosome 5q in the VCaP prostate cancer cell line.

Trapman J., Jenster G.

Hum. Genet. 132:709-713(2013).

Nucleotide resolution analysis of TMPRSS2 and ERG rearrangements in prostate cancer.

Yegnasubramanian S.

J. Pathol. 230:174-183(2013).

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.

Morrissey M.P., Sellers W.R., Schlegel R., Garraway L.A.

Nature 483:603-607(2012).

Identification of replication competent murine gammaretroviruses in commonly used prostate cancer cell lines.

Rein A., De Marzo A.M.

PLoS ONE 6:E20874-E20874(2011).

Spectral karyotype (SKY) analysis of human prostate carcinoma cell lines.

Nordeen S.K., Miller G.J., Varella-Garcia M.

Prostate 57:226-244(2003).

Molecular characterization of human prostate carcinoma cell lines.";

Smith E.E., Miller H.L., Nordeen S.K., Miller G.J., Lucia M.S.

Prostate 57:205-225(2003).

VCaP, a cell-based model system of human prostate cancer.";

Vessella R.L., Lin D.L., Pienta K.J.

In Vivo 15:163-168(2001).