NCC-CCS1B-C1Homo sapiens (Human)Cancer cell line
Also known as: NCCCCS1BC1
AI Summary
No AI-generated summary available for this cell line.
Basic Information
| Database ID | CVCL_B3TS |
|---|---|
| Species | Homo sapiens (Human) |
| Tissue Source | Left thigh, hypodermis[UBERON:UBERON_0002072] |
Donor Information
| Age | 43 |
|---|---|
| Age Category | Adult |
| Sex | Female |
Disease Information
| Disease | Soft tissue sarcoma |
|---|---|
| Lineage | Soft Tissue |
| Subtype | Clear Cell Sarcoma |
| OncoTree Code | CCS |
DepMap Information
| Source Type | Academic lab |
|---|---|
| Source ID | ACH-002792_source |
Known Sequence Variations
| Type | Gene/Protein | Description | Zygosity | Note | Source |
|---|---|---|---|---|---|
| Gene fusion | ATF1 | EWSR1-ATF1, EWS-ATF | - | Type 2: EWSR1 exon 5 fused to ATF1 exon 5 | PubMed=12237889 |
Haplotype Information (STR Profile)
Short Tandem Repeat (STR) profile for cell line authentication.
Amelogenin
X
CSF1PO
10
D13S317
8
D16S539
11
D18S51
16,19
D21S11
30,31
D3S1358
17
D5S818
11
D7S820
11,12
D8S1179
12,14
FGA
23
Penta D
9,12
Penta E
12,19
TH01
6
TPOX
11
vWA
15,16
Gene Expression Profile
Gene expression levels and statistical distribution
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Full DepMap dataset with combined data across cell lines
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Publications
Functional genomics of human clear cell sarcoma: genomic, transcriptomic and chemical biology landscape for clear cell sarcoma.
Berlow N.E., Schoffski P., Keller C.
Br. J. Cancer 128:1941-1954(2023).